Biology literature search: AlphaFold protein structure prediction

Task Goal

Validate paper-search-pro on a cross-disciplinary literature discovery scenario.

输入

• Query: AlphaFold protein structure prediction
• Discipline: Biology / Structural Biology
• Source: Crossref
• Limit: 10 records

Prompt / 命令

Run literature discovery with the Crossref source and retain raw JSON evidence.

输出结果

Output: ld-biology-alphafold

Search Result

• Query: AlphaFold protein structure prediction
• Discipline: Biology / Structural Biology
• Source: Crossref
• Result count: 10

Top 5 Papers

1. Protein structure prediction with AlphaFold-Multimer v1 (2024)
   • Authors: Elias Adriaenssens
   • Source: Crossref; ID: 10.17504/protocols.io.81wgbz25qgpk/v1
2. KubeFold: Kubernetes-native automation of AlphaFold protein structure prediction workflows (2026)
   • Authors: Paweł Skrzyński, Mateusz Wozniak
   • Source: Crossref; ID: 10.2139/ssrn.6614765
3. Revolutionizing structural biology: AI-driven protein structure prediction from AlphaFold to next-generation innovations (2025)
   • Authors: No authors listed
   • Source: Advances in Protein Chemistry and Structural Biology; ID: 10.1016/bs.apcsb.2025.04.002
4. Accurate prediction of protein assembly structure by combining AlphaFold and symmetrical docking (2023)
   • Authors: Mads Jeppesen, Ingemar André
   • Source: Crossref; ID: 10.1101/2023.06.22.546069
5. AlphaInterp: Mechanistic Interpretability of AlphaFold 3 Reveals How Evolutionary Information Shapes Protein Structure Prediction (2026)
   • Authors: Jonathan Feldman, Jeffrey Skolnick
   • Source: Crossref; ID: 10.64898/2026.04.22.720175

Evidence Files

• Internal raw JSON: outputs/tasks/literature-discovery/ld-biology-alphafold/raw/crossref_results.json
• Internal structured output: outputs/tasks/literature-discovery/ld-biology-alphafold/output.md

评审结论

PASS。 This task is part of the corrected public package covering Medicine, Physics, Chemistry, Biology, and Computer Science.